The Brain Transcriptome Database (BrainTx) project aims to create an integrated platform to visualize and analyze our original transcriptome data and publicly accessible transcriptome data related to the genetics that underlie the development, function, and dysfunction stages and states of the brain. BrainTx was developed from the Cerebellar Development Transcriptome Database (CDT-DB). Information about CDT-DB can be downloaded using the "Download" option in the menu bar.

Quick Serch

Brain distribution (select brain region)

   
This function is effective only for brain distribution search.

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Brain specificity (select tissue distribution pattern)

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Full CDT Data Search

Full Data Search

Search for the genes with spatiotemporal gene expression profiles of brain structures and regions, etc.

Gene Expression Search Menu

What's new

RSS
April 1, 2015   
BrainTx (formerly CDT-DB)
ver.5.0 released.
March 20, 2015   
ISH images were added.
February 27, 2015   
ISH images were added.
 

Brain Development Transcriptome Informatics

Experimental data
Experimental information can be downloaded using the "Download" option in the menu bar.
Fluorescent Differential Display

Fluorescent
Differential
Display

Developmental RT-PCR

Developmental
RT-PCR

cDNA Microarray (CDT array)

cDNA
Microarray
(CDT array)

In situ Hybridization Histochemistry

In situ
Hybridization
Histochemistry

Tissue-specific RT-PCR

Tissue-specific
RT-PCR

GeneChip

GeneChip

Spatio-temporal gene expression profile information
Temporal, developmental gene xpression profiles

Temporal,
developmental
gene expression
profiles

Cerebellar developmental (CD) gene category

Brain gene category

Tissue-specific RT-PCR

Spatial, cellular gene expression profiles

GeneChip

Brain specificity of gene expression

 

INCF Japan Node

J-Node Cross-database Search

International
Neuroinformatics
Coordinating Facility

The RIKEN integrated database of mammals



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Copyright (C) 2005-2015 by BrainTx, NIJC, RIKEN-BSI, Japan. All rights reserved. Updated: April 1, 2015. Ver.5.0