The Brain Transcriptome Database (BrainTx) project aims to create an integrated platform to visualize and analyze our original transcriptome data and publicly accessible transcriptome data related to the genetics that underlie the development, function, and dysfunction stages and states of the brain. BrainTx was developed from the Cerebellar Development Transcriptome Database (CDT-DB). Information about CDT-DB can be downloaded using the "Download" option in the menu bar.

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Brain distribution (select brain region)

   
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Brain specificity (select tissue distribution pattern)

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Full CDT Data Search

Full Data Search

Search for the genes with spatiotemporal gene expression profiles of brain structures and regions, etc.

Gene Expression Search Menu

What's new

RSS
April 1, 2019
BrainTx ver.5.4 was released.
September 20, 2018   
ISH images were added.
July 10, 2018   
ISH images were added.
May 9, 2018   
ISH images were added.
 

Brain Development Transcriptome Informatics

Experimental data
Experimental information can be downloaded using the "Download" option in the menu bar.
Fluorescent Differential Display

Fluorescent
Differential
Display

Developmental RT-PCR

Developmental
RT-PCR

cDNA Microarray (CDT array)

cDNA
Microarray
(CDT array)

In situ Hybridization Histochemistry

In situ
Hybridization
Histochemistry

Tissue-specific RT-PCR

Tissue-specific
RT-PCR

GeneChip

GeneChip

Spatio-temporal gene expression profile information
Temporal, developmental gene xpression profiles

Temporal,
developmental
gene expression
profiles

Cerebellar developmental (CD) gene category

Brain gene category

Tissue-specific RT-PCR

Spatial, cellular gene expression profiles

GeneChip

Brain specificity of gene expression

 

INCF Japan Node

 International
 Neuroinformatics
 Coordinating Facility

RIKEN MetaDatabase



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CC-BY-SACopyright (C) 2005-2019 BrainTx by BrainTx platform committee is licensed under CC BY-SA 4.0.
Updated: April 1, 2019. Ver.5.4